SCOPe 2.06: Domain d1ut5a2: 1ut5 A:20-185

Lineage for d1ut5a2 (1ut5 A:20-185)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.120: PIN domain-like [88722] (1 superfamily)
   3 layers, a/b/a; core: parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.120.1: PIN domain-like [88723] (3 families)

5. Family c.120.1.2: 5' to 3' exonuclease catalytic domain [53045] (4 proteins)
   contains an alpha-helical arch and additional strand 6 antiparallel to the rest; strand order 321456; similarity to the resolvase-like fold

6. Protein T5 5'-exonuclease [53050] (1 species)

7. Species Bacteriophage T5 [TaxId:10726] [53051] (6 PDB entries)

8. Domain d1ut5a2: 1ut5 A:20-185 [99903]
   Other proteins in same PDB: d1ut5a1, d1ut5b1
   complexed with mn

Details for d1ut5a2

PDB Entry: 1ut5, 2.75 Å

PDB Description: divalent metal ions (manganese) bound to t5 5'-exonuclease

PDB Compounds: (A:) exodeoxyribonuclease

SCOPe Domain Sequences for d1ut5a2:

Sequence; same for both SEQRES and ATOM records:

>d1ut5a2 c.120.1.2 (A:20-185) T5 5'-exonuclease {Bacteriophage T5 [TaxId: 10726]}
rnlmivdgtnlgfrfkhnnskkpfassyvstiqslaksysarttivlgdkgksvfrlehl
peykgnrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivkl
ighlydhvwlistdgdwdtlltdkvsrfsfttrreyhlrdmyehhn

Timeline for d1ut5a2:

• d1ut5a2 first appeared in SCOP 1.67
  
• d1ut5a2 appears in SCOPe 2.05
  
• d1ut5a2 appears in SCOPe 2.07
  
• d1ut5a2 appears in the current release, SCOPe 2.08