SCOP 1.69: Domain d1urzd2: 1urz D:2-302

Lineage for d1urzd2 (1urz D:2-302)

1. Root: SCOP 1.69

2. Class f: Membrane and cell surface proteins and peptides [56835] (47 folds)

3. Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
   2 intertwined domains; all-beta and alpha+beta

4. Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (1 family)

5. Family f.10.1.1: Viral glycoprotein, central and dimerisation domains [56984] (2 proteins)

6. Protein Envelope glycoprotein [56985] (2 species)

7. Species Tick-borne encephalitis virus [TaxId:11084] [56986] (2 PDB entries)

8. Domain d1urzd2: 1urz D:2-302 [99845]
   Other proteins in same PDB: d1urza1, d1urzb1, d1urzc1, d1urzd1, d1urze1, d1urzf1

Details for d1urzd2

PDB Entry: 1urz, 2.7 Å

PDB Description: low ph induced, membrane fusion conformation of the envelope protein of tick-borne encephalitis virus

SCOP Domain Sequences for d1urzd2:

Sequence, based on SEQRES records:

>d1urzd2 f.10.1.1 (D:2-302) Envelope glycoprotein {Tick-borne encephalitis virus}
rcthlenrdfvtgtqgttrvtlvlelggcvtitaegkpsmdvwldaiyqenpaktreycl
haklsdtkvaarcptmgpatlaeehqggtvckrdqsdrgwgnhcglfgkgsivacvkaac
eakkkatghvydankivytvkvephtgdyvaanethsgrktasftissektiltmgeygd
vsllcrvasgvdlaqtvileldktvehlptawqvhrdwfndlalpwkhegaqnwnnaerl
vefgaphavkmdvynlgdqtgvllkalagvpvahiegtkyhlksghvtcevgleklkmkg
l

Sequence, based on observed residues (ATOM records):

>d1urzd2 f.10.1.1 (D:2-302) Envelope glycoprotein {Tick-borne encephalitis virus}
rcthlenrdfvtgtqgttrvtlvlelggcvtitaegkpsmdvwldaiyqenpaktreycl
haklsdtkvaarcptmgpatlaeehqggtvckrdqsdrgwgnhcglfgkgsivacvkaac
eakkkatghvydankivytvkvephtrktasftissektiltmgeygdvsllcrvasgvd
laqtvileldktveptawqvhrdwfndlalpwkhegaqnwnnaerlvefgaphavkmdvy
nlgdqtgvllkalagvpvahiegtkyhlksghvtcevgleklkmkgl

Timeline for d1urzd2:

• d1urzd2 first appeared in SCOP 1.67
  
• d1urzd2 appears in SCOP 1.71
  
• d1urzd2 appears in the current release, SCOPe 2.08