SCOPe 2.06: Domain d1ur5a1: 1ur5 A:2-143

Lineage for d1ur5a1 (1ur5 A:2-143)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)

6. Protein Malate dehydrogenase [51849] (13 species)

7. Species Chloroflexus aurantiacus [TaxId:1108] [69415] (7 PDB entries)
   Uniprot P80040

8. Domain d1ur5a1: 1ur5 A:2-143 [99807]
   Other proteins in same PDB: d1ur5a2, d1ur5c2
   complexed with cd, cl, na, nad

Details for d1ur5a1

PDB Entry: 1ur5, 1.75 Å

PDB Description: stabilization of a tetrameric malate dehydrogenase by introduction of a disulfide bridge at the dimer/dimer interface

PDB Compounds: (A:) malate dehydrogenase

SCOPe Domain Sequences for d1ur5a1:

Sequence, based on SEQRES records:

>d1ur5a1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}
rkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvtg
tnnyadtansdvivvtsgaprkpgmsredlikvnaditracisqaaplspnaviimvnnp
ldamtylaaevsgfpkervigq

Sequence, based on observed residues (ATOM records):

>d1ur5a1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}
rkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvtg
tnnyadtansdvivvtsgaedlikvnaditracisqaaplspnaviimvnnpldamtyla
aevsgfpkervigq

Timeline for d1ur5a1:

• d1ur5a1 first appeared in SCOP 1.67
  
• d1ur5a1 appears in SCOPe 2.05
  
• d1ur5a1 appears in SCOPe 2.07
  
• d1ur5a1 appears in the current release, SCOPe 2.08