SCOPe 2.05: Domain d1uocb_: 1uoc B:

Lineage for d1uocb_ (1uoc B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.9: CAF1-like ribonuclease [102492] (3 proteins)

6. Protein Pop2 RNase D domain [102493] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [102494] (1 PDB entry)

8. Domain d1uocb_: 1uoc B: [99687]
   complexed with ca, xe

Details for d1uocb_

PDB Entry: 1uoc, 2.3 Å

PDB Description: x-ray structure of the rnase domain of the yeast pop2 protein

PDB Compounds: (B:) pop2

SCOPe Domain Sequences for d1uocb_:

Sequence, based on SEQRES records:

>d1uocb_ c.55.3.9 (B:) Pop2 RNase D domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ppiflpppnylfvrdvwksnlysefavirqlvsqynhvsistefvgtlarpigtfrskvd
yhyqtmranvdflnpiqlglslsdangnkpdngpstwqfnfefdpkkeimsteslellrk
sginfekhenlgidvfefsqllmdsglmmddsvtwityhaaydlgflinilmndsmpnnk
edfewwvhqympnfydlnlvykiiqefknpqlqqssqqqqqqqyslttladelglprfsi
ftttggqsllmllsfcqlsklsmhkfpngtdfakyqgviygidgdq

Sequence, based on observed residues (ATOM records):

>d1uocb_ c.55.3.9 (B:) Pop2 RNase D domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ppiflpppnylfvrdvwksnlysefavirqlvsqynhvsistefvgvdyhyqtmranvdf
lnpiqlglslsdangnkpdngpstwqfnfefdpkkeimsteslellrksginfekhenlg
idvfefsqllmdsglmmddsvtwityhaaydlgflinilmndsmpnnkedfewwvhqymp
nfydlnlvykiislttladelglprfsiftttggqsllmllsfcqlsklsmhkfpngtdf
akyqgviygidgdq

Timeline for d1uocb_:

• d1uocb_ first appeared in SCOP 1.67
  
• d1uocb_ appears in SCOPe 2.04
  
• d1uocb_ appears in SCOPe 2.06
  
• d1uocb_ appears in the current release, SCOPe 2.08