Lineage for d1umya_ (1umy A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2840803Superfamily c.1.26: Homocysteine S-methyltransferase [82282] (1 family) (S)
  5. 2840804Family c.1.26.1: Homocysteine S-methyltransferase [82283] (2 proteins)
    Pfam PF02574
  6. 2840805Protein Betaine-homocysteine S-methyltransferase [82284] (2 species)
  7. 2840815Species Norway rat (Rattus norvegicus) [TaxId:10116] [102107] (1 PDB entry)
  8. 2840816Domain d1umya_: 1umy A: [99635]
    complexed with bme, zn

Details for d1umya_

PDB Entry: 1umy (more details), 2.5 Å

PDB Description: bhmt from rat liver
PDB Compounds: (A:) Betaine--homocysteine S-methyltransferase 1

SCOPe Domain Sequences for d1umya_:

Sequence, based on SEQRES records: (download)

>d1umya_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
krgilerlnagevvigdggfvfalekrgyvkagpwtpeaavehpeavrqlhreflragsn
vmqtftfyasedklenrgnyvaekisgqkvneaacdiarqvadegdalvaggvsqtpsyl
scksetevkkifhqqlevfmkknvdfliaeyfehveeavwavealktsgkpiaatmcigp
egdlhgvspgecavrlvkagaaivgvnchfdpstslqtiklmkegleaarlkaylmsqpl
ayhtpdcgkqgfidlpefpfgleprvatrwdiqkyareaynlgvryiggccgfepyhira
iaeelapergflppasekhgswgsgldmhtkpwirararkeywqnlriasgrpynpsmsk
pdawgvtkgaaelmqqkeatteqqlralfe

Sequence, based on observed residues (ATOM records): (download)

>d1umya_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
krgilerlnagevvigdggfvfalekrgyvkagpwtpeaavehpeavrqlhreflragsn
vmqtftfyassgqkvneaacdiarqvadegdalvaggvsqtpsylscksetevkkifhqq
levfmkknvdfliaeyfehveeavwavealktsgkpiaatmcigpegdlhgvspgecavr
lvkagaaivgvnchfdpstslqtiklmkegleaarlkaylmsqplayhtpdcgkqgfidl
pefpfgleprvatrwdiqkyareaynlgvryiggccgfepyhiraiaeelapergflppa
sekhgswgsgldmhtkpwirararkeywqnlriasgrpynpsmskpdawgvtkgaaelmq
qkeatteqqlralfe

SCOPe Domain Coordinates for d1umya_:

Click to download the PDB-style file with coordinates for d1umya_.
(The format of our PDB-style files is described here.)

Timeline for d1umya_: