Lineage for d1uiub_ (1uiu B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2913609Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. 2914454Protein Nickel-binding periplasmic protein NikA [102694] (2 species)
    similar domain organization to oligo- and dipeptide-binding protein
  7. 2914459Species Escherichia coli [TaxId:562] [102695] (28 PDB entries)
  8. 2914492Domain d1uiub_: 1uiu B: [99435]
    has additional subdomain(s) that are not in the common domain

Details for d1uiub_

PDB Entry: 1uiu (more details), 1.85 Å

PDB Description: crystal structures of the liganded and unliganded nickel binding protein nika from escherichia coli (nickel unliganded form)
PDB Compounds: (B:) Nickel-binding periplasmic protein

SCOPe Domain Sequences for d1uiub_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1uiub_ c.94.1.1 (B:) Nickel-binding periplasmic protein NikA {Escherichia coli [TaxId: 562]}
deittawpvnvgplnphlytpnqmfaqsmvyeplvkyqadgsvipwlakswthsedgktw
tftlrddvkfsngepfdaeaaaenfravldnrqrhawlelanqivdvkalsktelqitlk
sayypflqelalprpfrfiapsqfknhetmngikapigtgpwilqesklnqydvfvrnen
ywgekpaikkitfnvipdpttravafetgdidllygnegllpldtfarfsqnpayhtqls
qpietvmlalntakaptnelavrealnyavnkkslidnalygtqqvadtlfapsvpyanl
glkpsqydpqkakallekagwtlpagkdirekngqplrielsfigtdalsksmaeiirad
mrqigadvsligeeessiyarqrdgrfgmifhrtwgapydphaflssmrvpshadfqaqq
gladkplidkeigevlathdetqrqalyrdiltrlhdeavylpisyismmvvskpelgni
pyapiateipfeqikp

SCOPe Domain Coordinates for d1uiub_:

Click to download the PDB-style file with coordinates for d1uiub_.
(The format of our PDB-style files is described here.)

Timeline for d1uiub_:

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d1uiua_