Lineage for d1t03l1 (1t03 L:1-107)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547289Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 547739Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (170 PDB entries)
  8. 547931Domain d1t03l1: 1t03 L:1-107 [99058]
    Other proteins in same PDB: d1t03a1, d1t03a2, d1t03b_, d1t03h1, d1t03h2, d1t03l2
    part of Fab 28 against HIV-1 RT
    complexed with mg, mrg, tfo; mutant

Details for d1t03l1

PDB Entry: 1t03 (more details), 3.1 Å

PDB Description: HIV-1 reverse transcriptase crosslinked to tenofovir terminated template-primer (complex P)

SCOP Domain Sequences for d1t03l1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1t03l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
diqmtqttsslsaslgdrvtiscsasqdissylnwyqqkpegtvklliyytsslhsgvps
rfsgsgsgtdysltisnlepediatyycqqyskfpwtfgggtkleik

SCOP Domain Coordinates for d1t03l1:

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Timeline for d1t03l1: