Lineage for d1soji_ (1soj I:)

  1. Root: SCOP 1.71
  2. 530466Class a: All alpha proteins [46456] (226 folds)
  3. 546038Fold a.211: HD-domain/PDEase-like [109603] (1 superfamily)
    multihelical; consists of two different alpha-helical bundles
  4. 546039Superfamily a.211.1: HD-domain/PDEase-like [109604] (3 families) (S)
  5. 546057Family a.211.1.2: PDEase [48548] (6 proteins)
    Pfam 00233; multihelical; can be divided into three subdomains
  6. 546132Protein cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b [101441] (1 species)
  7. 546133Species Human (Homo sapiens) [TaxId:9606] [101442] (2 PDB entries)
  8. 546146Domain d1soji_: 1soj I: [98950]

Details for d1soji_

PDB Entry: 1soj (more details), 2.9 Å

PDB Description: catalytic domain of human phosphodiesterase 3b in complex with ibmx

SCOP Domain Sequences for d1soji_:

Sequence, based on SEQRES records: (download)

>d1soji_ a.211.1.2 (I:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens)}
ldlilveeydsliekmsnwnfpifelvekmgeksgrilsqvmytlfqdtglleifkiptq
qfmnyfralengyrdipyhnrihatdvlhavwylttrpvpglqqihngcgtgnetdsdgr
inhgriayisskscsnpdesygclssnipalelmalyvaaamhdydhpgrtnaflvatna
pqavlyndrsvlenhhaasawnlylsrpeynfllhldhvefkrfrflvieailatdlllh
fdflaefnakandvnsngiewsnendrllvcqvcikladingpakvrdlhlkwtegivne
fyeqgdeeanlglpispfmdrsspqlaklqesfithivgplcnsydaagllpgqwleaee
dndtesgddedgeeldtedeemennlnpkpprrksrrrifcqlmhhltenhkiwk

Sequence, based on observed residues (ATOM records): (download)

>d1soji_ a.211.1.2 (I:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens)}
ldlilveeydsliekmsnwnfpifelvekmgeksgrilsqvmytlfqdtglleifkiptq
qfmnyfralengyrdipyhnrihatdvlhavwylttrpvpglqqihngriayisskscsn
pdesygclssnipalelmalyvaaamhdydhpgrtnaflvatnapqavlyndrsvlenhh
aasawnlylsrpeynfllhldhvefkrfrflvieailatdlllhfdflaefnakandvns
ngiewsnendrllvcqvcikladingpakvrdlhlkwtegivnefyeqgdeeanlglpis
pfmdrsspqlaklqesfithivgplcnsydaagllpgqwleaesrrrifcqlmhhltenh
kiwk

SCOP Domain Coordinates for d1soji_:

Click to download the PDB-style file with coordinates for d1soji_.
(The format of our PDB-style files is described here.)

Timeline for d1soji_: