SCOPe 2.08: Domain d1sh3b_: 1sh3 B:

Lineage for d1sh3b_ (1sh3 B:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein Viral RNA polymerase [56695] (17 species)

7. Species Norwalk virus [TaxId:11983] [103400] (8 PDB entries)

8. Domain d1sh3b_: 1sh3 B: [98880]
   complexed with mg
   missing some secondary structures that made up less than one-third of the common domain

Details for d1sh3b_

PDB Entry: 1sh3, 2.95 Å

PDB Description: Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)

PDB Compounds: (B:) RNA polymerase

SCOPe Domain Sequences for d1sh3b_:

Sequence; same for both SEQRES and ATOM records:

>d1sh3b_ e.8.1.4 (B:) Viral RNA polymerase {Norwalk virus [TaxId: 11983]}
kgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvmr
dqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghphh
mrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrll
wgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydadys
rwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvpc
tsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklke
yglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhe
dpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqepmfrw
mrfsdlstwegdrnlapsfvned

Timeline for d1sh3b_:

• d1sh3b_ first appeared in SCOP 1.67
  
• d1sh3b_ appears in SCOPe 2.07