SCOP 1.73: Domain d1sgva2: 1sgv A:3-235

Lineage for d1sgva2 (1sgv A:3-235)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
   consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold

4. Superfamily d.265.1: Pseudouridine synthase [55120] (4 families)
   the active site is the most conserved structural region of the superfamily and is located between the subdomains

5. Family d.265.1.2: Pseudouridine synthase II TruB [69746] (1 protein)
   contains C-terminal PUA domain

6. Protein Pseudouridine synthase II TruB [69747] (5 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [103017] (1 PDB entry)

8. Domain d1sgva2: 1sgv A:3-235 [98859]
   Other proteins in same PDB: d1sgva1, d1sgvb1

Details for d1sgva2

PDB Entry: 1sgv, 1.9 Å

PDB Description: structure of trna psi55 pseudouridine synthase (trub)

PDB Compounds: (A:) tRNA pseudouridine synthase B

SCOP Domain Sequences for d1sgva2:

Sequence, based on SEQRES records:

>d1sgva2 d.265.1.2 (A:3-235) Pseudouridine synthase II TruB {Mycobacterium tuberculosis [TaxId: 1773]}
atgpgivvidkpagmtshdvvgrcrrifatrrvghagtldpmatgvlvigieratkilgl
ltaapksyaatirlgqttstedaegqvlqsvpakhltieaidaamerlrgeirqvpssvs
aikvggrrayrlarqgrsvqlearpiridrfellaarrrdqlididveidcssgtyiral
ardlgdalgvgghvtalrrtrvgrfeldqarslddlaerpalslsldeacllm

Sequence, based on observed residues (ATOM records):

>d1sgva2 d.265.1.2 (A:3-235) Pseudouridine synthase II TruB {Mycobacterium tuberculosis [TaxId: 1773]}
atgpgivvidkpagmtshdvvgrcrrifatrrvghagtldpmatgvlvigieratkilgl
ltaapksyaatirlgqttstedaegqvlqsvpakhltieaidaamerlrgeilearpiri
drfellaarrrdqlididveidcssgtyiralardlgdalgvgghvtalrrtrvgrfeld
qarslddlaerpalslsldeacllm

Timeline for d1sgva2:

• d1sgva2 first appeared in SCOP 1.67
  
• d1sgva2 appears in SCOP 1.71
  
• d1sgva2 appears in SCOP 1.75
  
• d1sgva2 appears in the current release, SCOPe 2.08