SCOPe 2.06: Domain d1s5ya_: 1s5y A:

Lineage for d1s5ya_ (1s5y A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.1: Globin-like [46457] (2 superfamilies)
   core: 6 helices; folded leaf, partly opened

4. Superfamily a.1.1: Globin-like [46458] (5 families)

5. Family a.1.1.2: Globins [46463] (27 proteins)
   Heme-binding protein

6. Protein Hemoglobin, alpha-chain [46486] (24 species)

7. Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (12 PDB entries)

8. Domain d1s5ya_: 1s5y A: [98587]
   Other proteins in same PDB: d1s5yb_, d1s5yd_
   complexed with hem

Details for d1s5ya_

PDB Entry: 1s5y, 2.5 Å

PDB Description: the crystal structure of trematomus bernacchii hemoglobin oxidized by ferricyanide

PDB Compounds: (A:) hemoglobin alpha chain

SCOPe Domain Sequences for d1s5ya_:

Sequence; same for both SEQRES and ATOM records:

>d1s5ya_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Emerald rockcod (Pagothenia bernacchii) [TaxId: 40690]}
slsdkdkaavralwskigksadaigndalsrmivvypqtktyfshwpdvtpgsphikahg
kkvmggialavskiddlktglmelseqhayklrvdpanfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr

Timeline for d1s5ya_:

• d1s5ya_ first appeared in SCOP 1.67
  
• d1s5ya_ appears in SCOPe 2.05
  
• d1s5ya_ appears in SCOPe 2.07
  
• d1s5ya_ appears in the current release, SCOPe 2.08