SCOP 1.71: Domain d1s5ma_: 1s5m A:

Lineage for d1s5ma_ (1s5m A:)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (6 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (1 protein)

6. Protein D-xylose isomerase [51666] (12 species)

7. Species Streptomyces olivochromogenes [TaxId:1963] [51669] (9 PDB entries)

8. Domain d1s5ma_: 1s5m A: [98565]
   complexed with agc, mn, na

Details for d1s5ma_

PDB Entry: 1s5m, 0.98 Å

PDB Description: xylose isomerase in substrate and inhibitor michaelis states: atomic resolution studies of a metal-mediated hydride shift

SCOP Domain Sequences for d1s5ma_:

Sequence; same for both SEQRES and ATOM records:

>d1s5ma_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces olivochromogenes}
syqptpedrftfglwtvgwqgrdpfgdatrpaldpvetvqrlaelgahgvtfhdddlipf
gssdtereshikrfrqaldatgmtvpmattnlfthpvfkdggftandrdvrryalrktir
nidlavelgaktyvawggregaesgaakdvrvaldrmkeafdllgeyvtsqgydirfaie
pkpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagkl
fhidlngqsgikydqdlrfgagdlraafwlvdllesagyegprhfdfkpprtedidgvwa
saagcmrnylilkeraaafradpevqealrasrldelaqptaadgvqelladrtafedfd
vdaaaargmaferldqlamdhllgar

Timeline for d1s5ma_:

• d1s5ma_ first appeared in SCOP 1.67
  
• d1s5ma_ appears in SCOP 1.69
  
• d1s5ma_ appears in SCOP 1.73
  
• d1s5ma_ appears in the current release, SCOPe 2.08