SCOPe 2.08: Domain d1s4fd_: 1s4f D:

Lineage for d1s4fd_ (1s4f D:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein Viral RNA polymerase [56695] (17 species)

7. Species Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries)

8. Domain d1s4fd_: 1s4f D: [98498]

Details for d1s4fd_

PDB Entry: 1s4f, 3 Å

PDB Description: Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)

PDB Compounds: (D:) RNA-dependent RNA polymerase

SCOPe Domain Sequences for d1s4fd_:

Sequence, based on SEQRES records:

>d1s4fd_ e.8.1.4 (D:) Viral RNA polymerase {Bovine viral diarrhea virus [TaxId: 11099]}
virehnkwilkkirfqgnlntkkmlnpgklseqldregrkrniynhqigtimssagirle
klpivraqtdtktfheairdkidksenrqnpelhnklleifhtiaqptlkhtygevtweq
leagvnrkgaagflekknigevldsekhlveqlvrdlkagrkikyyetaipknekrdvsd
dwqagdlvvekrprviqypeaktrlaitkvmynwvkqqpvvipgyegktplfnifdkvrk
ewdsfnepvavsfdtkawdtqvtskdlqligeiqkyyykkewhkfidtitdhmtevpvit
adgevyirngqrgsgqpdtsagnsmlnvltmmyafcestgvpyksfnrvarihvcgddgf
litekglglkfankgmqilheagkpqkitegekmkvayrfediefcshtpvpvrwsdnts
shmagrdtavilskmatrldssgergttayekavafsfllmyswnplvrricllvlsqqp
etdpskhatyyykgdpigaykdvigrnlselkrtgfeklanlnlslstlgvwtkhtskri
iqdcvaigkeegnwlvkpdrlissktghlyipdkgftlqgkhye

Sequence, based on observed residues (ATOM records):

>d1s4fd_ e.8.1.4 (D:) Viral RNA polymerase {Bovine viral diarrhea virus [TaxId: 11099]}
virehnkwilkkirfqgnlntkkmlnpgklseqldregrkrniynhqigtimssagirle
klpivraqtdtktfheairdkidksenrqnpelhnklleifhtiaqptlkhtygevtweq
leagvnrkgaagflekknigevldsekhlveqlvrdlkagrkikyyetaipknekrdvsd
dwqagrprviqypeaktrlaitkvmynwvkqqpvvipgyegktplfnifdkvrkewdsfn
epvavsfdtkawdtqvtskdlqligeiqkyyykkewhkfidtitdhmtevpvitadgevy
irngqrgsgqpdtsagnsmlnvltmmyafcestgvpyksfnrvarihvcgddgflitekg
lglkfankgmqilheagkpqkitegekmkvayrfediefcshtpvpvrwsdntsshmagr
dtavilskmatrsgergttayekavafsfllmyswnplvrricllvlsqqpetdpskhat
yyykgdpigaykdvigrnlselkrtgfeklanlnlslstlgvwtkhtskriiqdcvaigk
eegnwlvkpdrlissktghlyipdkgftlqgkhye

Timeline for d1s4fd_:

• d1s4fd_ first appeared in SCOP 1.67
  
• d1s4fd_ appears in SCOPe 2.07