SCOPe 2.05: Domain d1s06a_: 1s06 A:

Lineage for d1s06a_ (1s06 A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438] (2 species)
   synonym: 7,8-diaminopelargonic acid synthase

7. Species Escherichia coli [TaxId:562] [53439] (11 PDB entries)

8. Domain d1s06a_: 1s06 A: [98255]
   complexed with na; mutant

Details for d1s06a_

PDB Entry: 1s06, 2.2 Å

PDB Description: crystal structure of the r253k mutant of 7,8-diaminopelargonic acid synthase

PDB Compounds: (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

SCOPe Domain Sequences for d1s06a_:

Sequence, based on SEQRES records:

>d1s06a_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}
mttddlafdqrhilhpytsmtsplpvypvvsaegcelilsdgrrlvdgmsswwaaihgyn
hpqlnaamksqidamshvmfggithapaielcrklvamtpqplecvfladsgsvavevam
kmalqywqakgearqrfltfrngyhgdtfgamsvcdpdnsmhslwkgylpenlfapapqs
rmdgewderdmvgfarlmaahrheiaaviiepivqgaggmrmyhpewlkrirkicdregi
lliadeiatgfgktgklfacehaeiapdilclgkaltggtmtlsatlttrevaetisnge
agcfmhgptfmgnplacaaanaslailesgdwqqqvadievqlreqlapardaemvadvr
vlgaigvvetthpvnmaalqkffveqgvwirpfgkliylmppyiilpqqlqrltaavnra
vqdetffcq

Sequence, based on observed residues (ATOM records):

>d1s06a_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}
mttddlafdqrhilhpytsmtsplpvypvvsaegcelilsdgrrlvdgmsswwaaihgyn
hpqlnaamksqidamshvmfggithapaielcrklvamtpqplecvfladsgsvavevam
kmalqywqakgearqrfltfrngyhgdtfgamsvcdpdnsmhslwkgylpenlfapapqs
rmgewderdmvgfarlmaahrheiaaviiepivqgaggmrmyhpewlkrirkicdregil
liadeiatgfgktgklfacehaeiapdilclgkaltggtmtlsatlttrevaetisngea
gcfmhgptfmgnplacaaanaslailesgdwqqqvadievqlreqlapardaemvadvrv
lgaigvvetthpvnmaalqkffveqgvwirpfgkliylmppyiilpqqlqrltaavnrav
qdetffcq

Timeline for d1s06a_:

• d1s06a_ first appeared in SCOP 1.67
  
• d1s06a_ appears in SCOPe 2.04
  
• d1s06a_ appears in SCOPe 2.06
  
• d1s06a_ appears in the current release, SCOPe 2.08