SCOP 1.71: Domain d1rurh1: 1rur H:1-113

Lineage for d1rurh1 (1rur H:1-113)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
   VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (148 PDB entries)

8. Domain d1rurh1: 1rur H:1-113 [97879]
   Other proteins in same PDB: d1rurh2, d1rurl1, d1rurl2
   part of Diels-Alder catalytic Fab 13G5
   complexed with zn

Details for d1rurh1

PDB Entry: 1rur, 1.5 Å

PDB Description: crystal structure (i) of native diels-alder antibody 13g5 fab at ph 8.0 with a data set collected at ssrl beamline 9-1.

SCOP Domain Sequences for d1rurh1:

Sequence; same for both SEQRES and ATOM records:

>d1rurh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}
evqleesgpelvrpgtsvkisckasgytftnywlgwvkqrpghgfewigdiypggvyttn
nekfrgkailtadtssstaymqlssltsedsavyfcaraggyytggdywgqgtsvtvss

Timeline for d1rurh1:

• d1rurh1 first appeared in SCOP 1.67
  
• d1rurh1 appears in SCOP 1.69
  
• d1rurh1 appears in SCOP 1.73
  
• d1rurh1 appears in the current release, SCOPe 2.08