Lineage for d1rpza1 (1rpz A:153-301)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2490779Fold c.108: HAD-like [56783] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2490780Superfamily c.108.1: HAD-like [56784] (26 families) (S)
    usually contains an insertion (sub)domain after strand 1
  5. 2491167Family c.108.1.9: phosphatase domain of polynucleotide kinase [82385] (2 protein domains)
    no insertion subdomains
  6. 2491172Protein Polynucleotide kinase, phosphatase domain [82386] (1 species)
  7. 2491173Species Bacteriophage T4 [TaxId:10665] [82387] (5 PDB entries)
  8. 2491177Domain d1rpza1: 1rpz A:153-301 [97720]
    Other proteins in same PDB: d1rpza2
    protein/DNA complex; complexed with adp, ca, dms

Details for d1rpza1

PDB Entry: 1rpz (more details), 2.9 Å

PDB Description: t4 polynucleotide kinase bound to 5'-tgcac-3' ssdna
PDB Compounds: (A:) Polynucleotide kinase

SCOPe Domain Sequences for d1rpza1:

Sequence, based on SEQRES records: (download)

>d1rpza1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

Sequence, based on observed residues (ATOM records): (download)

>d1rpza1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

SCOPe Domain Coordinates for d1rpza1:

Click to download the PDB-style file with coordinates for d1rpza1.
(The format of our PDB-style files is described here.)

Timeline for d1rpza1: