SCOPe 2.08: Domain d1rl4b_: 1rl4 B:

Lineage for d1rl4b_ (1rl4 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.167: Peptide deformylase [56419] (1 superfamily)
   alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix

4. Superfamily d.167.1: Peptide deformylase [56420] (2 families)
   nickel-dependent enzyme

5. Family d.167.1.1: Peptide deformylase [56421] (2 proteins)
   automatically mapped to Pfam PF01327

6. Protein Peptide deformylase [56422] (11 species)

7. Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [75581] (3 PDB entries)

8. Domain d1rl4b_: 1rl4 B: [97637]
   complexed with bl5, brr, co

Details for d1rl4b_

PDB Entry: 1rl4, 2.18 Å

PDB Description: Plasmodium falciparum peptide deformylase complex with inhibitor

PDB Compounds: (B:) formylmethionine deformylase

SCOPe Domain Sequences for d1rl4b_:

Sequence, based on SEQRES records:

>d1rl4b_ d.167.1.1 (B:) Peptide deformylase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
kivkypdpilrrrseevtnfddnlkrvvrkmfdimyeskgiglsapqvniskriivwnal
yekrkeenerifinpsiveqslvklkliegclsfpgiegkverpsivsisyydingykhl
kilkgihsrifqhefdhlngtlfidkmtqvdkkkvrpklnelirdyk

Sequence, based on observed residues (ATOM records):

>d1rl4b_ d.167.1.1 (B:) Peptide deformylase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
kivkypdpilrrrseevtnfddnlkrvvrkmfdimyeskgiglsapqvniskriivwnri
finpsiveqslvklkliegclsfpgiegkverpsivsisyydingykhlkilkgihsrif
qhefdhlngtlfidkmtqvdkkkvrpklnelirdyk

Timeline for d1rl4b_:

• d1rl4b_ first appeared in SCOP 1.67
  
• d1rl4b_ appears in SCOPe 2.07