Lineage for d1rk8a_ (1rk8 A:)

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 411877Fold d.58: Ferredoxin-like [54861] (48 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 412350Superfamily d.58.7: RNA-binding domain, RBD [54928] (4 families) (S)
  5. 412351Family d.58.7.1: Canonical RBD [54929] (20 proteins)
  6. 412443Protein RNA-binding protein 8 [89938] (2 species)
  7. 412444Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [89939] (3 PDB entries)
    CG8781 protein
  8. 412446Domain d1rk8a_: 1rk8 A: [97603]
    Other proteins in same PDB: d1rk8b_, d1rk8c_
    complexed with ca

Details for d1rk8a_

PDB Entry: 1rk8 (more details), 1.9 Å

PDB Description: structure of the cytosolic protein pym bound to the mago-y14 core of the exon junction complex

SCOP Domain Sequences for d1rk8a_:

Sequence, based on SEQRES records: (download)

>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster)}

Sequence, based on observed residues (ATOM records): (download)

>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster)}

SCOP Domain Coordinates for d1rk8a_:

Click to download the PDB-style file with coordinates for d1rk8a_.
(The format of our PDB-style files is described here.)

Timeline for d1rk8a_: