SCOP 1.67: Domain d1rjka_: 1rjk A:

Lineage for d1rjka_ (1rjk A:)

1. Root: SCOP 1.67

2. Class a: All alpha proteins [46456] (202 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (27 proteins)

6. Protein Vitamin D nuclear receptor [48528] (2 species)

7. Species Rat (Rattus norvegicus) [TaxId:10116] [101432] (4 PDB entries)

8. Domain d1rjka_: 1rjk A: [97571]
   complexed with vdz; mutant

Details for d1rjka_

PDB Entry: 1rjk, 1.99 Å

PDB Description: crystal structure of the rat vitamin d receptor ligand binding domain complexed with 2md and a synthetic peptide containing the nr2 box of drip 205

SCOP Domain Sequences for d1rjka_:

Sequence, based on SEQRES records:

>d1rjka_ a.123.1.1 (A:) Vitamin D nuclear receptor {Rat (Rattus norvegicus)}
klseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphladl
vsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdy
kydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklve
aiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmk
ltplvlevfgn

Sequence, based on observed residues (ATOM records):

>d1rjka_ a.123.1.1 (A:) Vitamin D nuclear receptor {Rat (Rattus norvegicus)}
klseeqqhiiailldahhktydptyadfrdfrppvrmplsmlphladlvsysiqkvigfa
kmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskagh
tlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlqt
yircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgn

Timeline for d1rjka_:

• d1rjka_ is new in SCOP 1.67
  
• d1rjka_ appears in SCOP 1.69
  
• d1rjka_ appears in the current release, SCOPe 2.08