SCOPe 2.05: Domain d1rh5a_: 1rh5 A:

Lineage for d1rh5a_ (1rh5 A:)

1. Root: SCOPe 2.05

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.41: Preprotein translocase SecY subunit [103490] (1 superfamily)
   10 transmembrane helices forming of a gated channel

4. Superfamily f.41.1: Preprotein translocase SecY subunit [103491] (2 families)
   duplication: consists of two similar structural parts

5. Family f.41.1.1: Preprotein translocase SecY subunit [103492] (1 protein)
   automatically mapped to Pfam PF00344

6. Protein Preprotein translocase SecY subunit [103493] (2 species)

7. Species Methanococcus jannaschii [TaxId:2190] [103494] (2 PDB entries)

8. Domain d1rh5a_: 1rh5 A: [97464]
   Other proteins in same PDB: d1rh5b_, d1rh5c_

Details for d1rh5a_

PDB Entry: 1rh5, 3.2 Å

PDB Description: the structure of a protein conducting channel

PDB Compounds: (A:) Preprotein translocase secY subunit

SCOPe Domain Sequences for d1rh5a_:

Sequence, based on SEQRES records:

>d1rh5a_ f.41.1.1 (A:) Preprotein translocase SecY subunit {Methanococcus jannaschii [TaxId: 2190]}
kklipilekipevelpvkeitfkeklkwtgivlvlyfimgcidvytagaqipaifefwqt
itasrigtlitlgigpivtagiimqllvgsgiiqmdlsipenralfqgcqkllsiimcfv
eavlfvgagafgiltpllaflviiqiafgsiiliyldeivskygigsgiglfiaagvsqt
ifvgalgpegylwkflnsliqgvpnieyiapiigtiivflmvvyaecmrveiplahgrik
gavgkypikfvyvsnipvilaaalfaniqlwglalyrmgipilghyeggravdgiayyls
tpyglssvisdpihaivymiamiitcvmfgifwvettgldpksmakrigslgmaikgfrk
sekaiehrlkryippltvmssafvgflatianfigalgggtgvlltvsivyrmyeqllre
rt

Sequence, based on observed residues (ATOM records):

>d1rh5a_ f.41.1.1 (A:) Preprotein translocase SecY subunit {Methanococcus jannaschii [TaxId: 2190]}
kklipilekipevelpvkeitfkeklkwtgivlvlyfimgcidvytagaqipaifefwqt
itasrigtlitlgigpivtagiimqllvgsgiiqmdlsipenralfqgcqkllsiimcfv
eavlfvgagafgiltpllaflviiqiafgsiiliyldeivskygigsgiglfiaagvsqt
ifvgalgpegylwkflnsliqgvpnieyiapiigtiivflmvvyaecmrveiplahgrik
gavgkypikfvyvsnipvilaaalfaniqlwglalyrmgipilghyeggravdgiayyls
tpyglssvisdpihaivymiamiitcvmfgifwvettgldpksmakrisekaiehrlkry
ippltvmssafvgflatianfigalgggtgvlltvsivyrmyeqllrert

Timeline for d1rh5a_:

• d1rh5a_ first appeared in SCOP 1.67
  
• d1rh5a_ appears in SCOPe 2.04
  
• d1rh5a_ appears in SCOPe 2.06
  
• d1rh5a_ appears in the current release, SCOPe 2.08