SCOPe 2.06: Domain d1rd8c1: 1rd8 C:11-329

Lineage for d1rd8c1 (1rd8 C:11-329)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (9 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (116 PDB entries)

8. Domain d1rd8c1: 1rd8 C:11-329 [97310]
   Other proteins in same PDB: d1rd8a2, d1rd8b_, d1rd8c2, d1rd8d_, d1rd8e2, d1rd8f_
   1918 human H1
   complexed with nag, ndg, po4

Details for d1rd8c1

PDB Entry: 1rd8, 3 Å

PDB Description: crystal structure of the 1918 human h1 hemagglutinin precursor (ha0)

PDB Compounds: (C:) Hemagglutinin

SCOPe Domain Sequences for d1rd8c1:

Sequence; same for both SEQRES and ATOM records:

>d1rd8c1 b.19.1.2 (C:11-329) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsiqsr

Timeline for d1rd8c1:

• d1rd8c1 first appeared in SCOP 1.67, called d1rd8c_
  
• d1rd8c1 was called d1rd8c_ in SCOPe 2.05
  
• d1rd8c1 appears in SCOPe 2.07
  
• d1rd8c1 appears in the current release, SCOPe 2.08