Lineage for d1rc8a1 (1rc8 A:153-301)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1883149Fold c.108: HAD-like [56783] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 1883150Superfamily c.108.1: HAD-like [56784] (26 families) (S)
    usually contains an insertion (sub)domain after strand 1
  5. 1883507Family c.108.1.9: phosphatase domain of polynucleotide kinase [82385] (2 proteins)
    no insertion subdomains
  6. 1883512Protein Polynucleotide kinase, phosphatase domain [82386] (1 species)
  7. 1883513Species Bacteriophage T4 [TaxId:10665] [82387] (5 PDB entries)
  8. 1883516Domain d1rc8a1: 1rc8 A:153-301 [97291]
    Other proteins in same PDB: d1rc8a2
    protein/DNA complex; complexed with adp, ca, dms

Details for d1rc8a1

PDB Entry: 1rc8 (more details), 2.75 Å

PDB Description: T4 Polynucleotide Kinase bound to 5'-GTCAC-3' ssDNA
PDB Compounds: (A:) Polynucleotide kinase

SCOPe Domain Sequences for d1rc8a1:

Sequence, based on SEQRES records: (download)

>d1rc8a1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

Sequence, based on observed residues (ATOM records): (download)

>d1rc8a1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

SCOPe Domain Coordinates for d1rc8a1:

Click to download the PDB-style file with coordinates for d1rc8a1.
(The format of our PDB-style files is described here.)

Timeline for d1rc8a1: