Lineage for d1r1za_ (1r1z A:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1779936Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 1779937Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 1781584Family b.29.1.13: Lectin leg-like [74904] (4 protein domains)
    mammalian protein related to legume lectins
    automatically mapped to Pfam PF03388
  6. 1781585Protein Carbohydrate-recognition domain of P58/ERGIC-53 [74905] (1 species)
  7. 1781586Species Norway rat (Rattus norvegicus) [TaxId:10116] [74906] (2 PDB entries)
  8. 1781588Domain d1r1za_: 1r1z A: [96840]
    complexed with ca

Details for d1r1za_

PDB Entry: 1r1z (more details), 2.4 Å

PDB Description: The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding
PDB Compounds: (A:) ERGIC-53 protein

SCOPe Domain Sequences for d1r1za_:

Sequence, based on SEQRES records: (download)

>d1r1za_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
hhhhssglvprgshmagtqaelphrrfeykysfkgphlvqsdgtvpfwahagnaipsadq
iriapslksqrgsvwtktkaafenwevevtfrvtgrgrigadglaiwytenqgldgpvfg
sadmwngvgiffdsfdndgkknnpaivvvgnngqinydhqndgatqalascqrdfrnkpy
pvrakityyqktltvminngftpdkndyefcakvenmviptqghfgisaatggladdhdv
lsfltfqlte

Sequence, based on observed residues (ATOM records): (download)

>d1r1za_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
hhhhssglvprgshmagtqahrrfeykysfkgphlvqsdgtvpfwahagnaipsadqiri
apslksqrgsvwtktkaafenwevevtfrvtgrgrigadglaiwytenqgldgpvfgsad
mwngvgiffdsfdndgkknnpaivvvgnngqinydhqndgatqalascqrdfrnkpypvr
akityyqktltvminngftpdkndyefcakvenmviptqghfgisaatggladdhdvlsf
ltfqlte

SCOPe Domain Coordinates for d1r1za_:

Click to download the PDB-style file with coordinates for d1r1za_.
(The format of our PDB-style files is described here.)

Timeline for d1r1za_: