SCOPe 2.08: Domain d1r1za1: 1r1z A:43-277

Lineage for d1r1za1 (1r1z A:43-277)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.13: Lectin leg-like [74904] (4 proteins)
   mammalian protein related to legume lectins
   automatically mapped to Pfam PF03388

6. Protein Carbohydrate-recognition domain of P58/ERGIC-53 [74905] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [74906] (2 PDB entries)

8. Domain d1r1za1: 1r1z A:43-277 [96840]
   Other proteins in same PDB: d1r1za2, d1r1zb2, d1r1zc2, d1r1zd2
   complexed with ca

Details for d1r1za1

PDB Entry: 1r1z, 2.4 Å

PDB Description: The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding

PDB Compounds: (A:) ERGIC-53 protein

SCOPe Domain Sequences for d1r1za1:

Sequence, based on SEQRES records:

>d1r1za1 b.29.1.13 (A:43-277) Carbohydrate-recognition domain of P58/ERGIC-53 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
agtqaelphrrfeykysfkgphlvqsdgtvpfwahagnaipsadqiriapslksqrgsvw
tktkaafenwevevtfrvtgrgrigadglaiwytenqgldgpvfgsadmwngvgiffdsf
dndgkknnpaivvvgnngqinydhqndgatqalascqrdfrnkpypvrakityyqktltv
minngftpdkndyefcakvenmviptqghfgisaatggladdhdvlsfltfqlte

Sequence, based on observed residues (ATOM records):

>d1r1za1 b.29.1.13 (A:43-277) Carbohydrate-recognition domain of P58/ERGIC-53 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
agtqahrrfeykysfkgphlvqsdgtvpfwahagnaipsadqiriapslksqrgsvwtkt
kaafenwevevtfrvtgrgrigadglaiwytenqgldgpvfgsadmwngvgiffdsfdnd
gkknnpaivvvgnngqinydhqndgatqalascqrdfrnkpypvrakityyqktltvmin
ngftpdkndyefcakvenmviptqghfgisaatggladdhdvlsfltfqlte

Timeline for d1r1za1:

• d1r1za1 first appeared in SCOP 1.67, called d1r1za_
  
• d1r1za1 appears in SCOPe 2.07