Lineage for d1qygl1 (1qyg L:1-107)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 363425Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 363551Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (121 PDB entries)
  8. 363562Domain d1qygl1: 1qyg L:1-107 [96591]
    Other proteins in same PDB: d1qygh1, d1qygh2, d1qygl2
    part of anti-cocaine Fab M82G2
    complexed with bcg

Details for d1qygl1

PDB Entry: 1qyg (more details), 1.81 Å

PDB Description: anti-cocaine antibody m82g2 complexed with benzoylecgonine

SCOP Domain Sequences for d1qygl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1qygl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
divmtqaapsvpvtpgesvsiscrssksllhsngytylhwflqrpgqspqlliyrvsnla
sgvpdrfsgsgsgtaftlrfsrveaedvgvyycmqhleypftfgsgtkleik

SCOP Domain Coordinates for d1qygl1:

Click to download the PDB-style file with coordinates for d1qygl1.
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Timeline for d1qygl1:

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Domains from same chain:
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d1qygl2