Lineage for d1q9od1 (1q9o D:1-111)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1287434Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1287435Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1287638Protein Immunoglobulin heavy chain variable domain, VH [88543] (21 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 1287896Species Mouse (Mus musculus), cluster 1 [TaxId:10090] [88548] (57 PDB entries)
    Uniprot P01796 # ! HV27_MOUSE Ig heavy chain V-III region A4
  8. 1287915Domain d1q9od1: 1q9o D:1-111 [96298]
    Other proteins in same PDB: d1q9oa1, d1q9oa2, d1q9ob2, d1q9oc1, d1q9oc2, d1q9od2
    part of Fab s45-18
    complexed with mg

Details for d1q9od1

PDB Entry: 1q9o (more details), 1.79 Å

PDB Description: S45-18 Fab Unliganded
PDB Compounds: (D:) S45-2 Fab (IgG1k) heavy chain

SCOPe Domain Sequences for d1q9od1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q9od1 b.1.1.1 (D:1-111) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}

SCOPe Domain Coordinates for d1q9od1:

Click to download the PDB-style file with coordinates for d1q9od1.
(The format of our PDB-style files is described here.)

Timeline for d1q9od1: