SCOP 1.71: Domain d1q9oa1: 1q9o A:1-107

Lineage for d1q9oa1 (1q9o A:1-107)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (35 PDB entries)

8. Domain d1q9oa1: 1q9o A:1-107 [96292]
   Other proteins in same PDB: d1q9oa2, d1q9ob1, d1q9ob2, d1q9oc2, d1q9od1, d1q9od2

Details for d1q9oa1

PDB Entry: 1q9o, 1.79 Å

PDB Description: S45-18 Fab Unliganded

SCOP Domain Sequences for d1q9oa1:

Sequence; same for both SEQRES and ATOM records:

>d1q9oa1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2}
divmsqfpsslavsagekvtmsckssqsllnsrtrksylawyqqkpgqfpklliywaatr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlrtfgggtkleikr

Timeline for d1q9oa1:

• d1q9oa1 first appeared in SCOP 1.67
  
• d1q9oa1 appears in SCOP 1.69
  
• d1q9oa1 appears in SCOP 1.73
  
• d1q9oa1 appears in the current release, SCOPe 2.08