SCOPe 2.08: Domain d1q9ld2: 1q9l D:112-211

Lineage for d1q9ld2 (1q9l D:112-211)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (7 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88576] (391 PDB entries)
   Uniprot P01864 # GCAB_MOUSE Ig gamma-2A chain C region secreted form (B allele) ! Uniprot P01863 #GCAA_MOUSE Ig gamma-2A chain C region, A allele; 86% sequence identity ! SQ NA # natural chimera; best hits are: Uniprot P01751 (Ig heavy chain V region B1-8/186-2) and Uniprot P01864 (Ig gamma-2A chain C region secreted form) ! Uniprot P01868 # GC1_MOUSE Ig gamma-1 chain C region secreted form ! Uniprot P01864 # GCAB_MOUSE (P01864) Ig gamma-2A chain C region ! Uniprot P01837 # KAC_MOUSE (P01837) Ig kappa chain C region ! Uniprot P01863 # GCAA_MOUSE Ig gamma-2A chain C region, A allele ! SQ NA # part of Fab 28 against HIV-1 RT ! Uniprot P01868 # ! GC1_MOUSE Ig gamma-1 chain C region secreted form

8. Domain d1q9ld2: 1q9l D:112-211 [96287]
   Other proteins in same PDB: d1q9la1, d1q9la2, d1q9lb1, d1q9lc1, d1q9lc2, d1q9ld1
   part of Fab s25-2
   complexed with mg, zn

Details for d1q9ld2

PDB Entry: 1q9l, 2.28 Å

PDB Description: S25-2 Fab Unliganded 2

PDB Compounds: (D:) S25-2 Fab (IgG1k) heavy chain

SCOPe Domain Sequences for d1q9ld2:

Sequence; same for both SEQRES and ATOM records:

>d1q9ld2 b.1.1.2 (D:112-211) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
akttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr

Timeline for d1q9ld2:

• d1q9ld2 first appeared in SCOP 1.67
  
• d1q9ld2 appears in SCOPe 2.07