Lineage for d1q9ka1 (1q9k A:1-107)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547289Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 547602Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (35 PDB entries)
  8. 547620Domain d1q9ka1: 1q9k A:1-107 [96276]
    Other proteins in same PDB: d1q9ka2, d1q9kb1, d1q9kb2
    part of Fab s25-2
    complexed with mg

Details for d1q9ka1

PDB Entry: 1q9k (more details), 1.96 Å

PDB Description: S25-2 Fab Unliganded 1

SCOP Domain Sequences for d1q9ka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q9ka1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2}

SCOP Domain Coordinates for d1q9ka1:

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Timeline for d1q9ka1:

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