Lineage for d1q8mb1 (1q8m B:16-134)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2019619Protein TREM-1 (triggering receptor expressed on myeloid cells 1) [101506] (2 species)
  7. 2019620Species Human (Homo sapiens) [TaxId:9606] [101507] (2 PDB entries)
    Uniprot Q9NP99 21-133
  8. 2019624Domain d1q8mb1: 1q8m B:16-134 [96216]
    Other proteins in same PDB: d1q8ma2, d1q8mb2, d1q8mc2, d1q8md2
    complexed with gsh, so4

Details for d1q8mb1

PDB Entry: 1q8m (more details), 2.6 Å

PDB Description: Crystal structure of the human myeloid cell activating receptor TREM-1
PDB Compounds: (B:) triggering receptor expressed on myeloid cells 1

SCOPe Domain Sequences for d1q8mb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q8mb1 b.1.1.1 (B:16-134) TREM-1 (triggering receptor expressed on myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d1q8mb1:

Click to download the PDB-style file with coordinates for d1q8mb1.
(The format of our PDB-style files is described here.)

Timeline for d1q8mb1: