Lineage for d1q8jb1 (1q8j B:301-558)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089689Superfamily c.1.21: Dihydropteroate synthetase-like [51717] (3 families) (S)
  5. 2089788Family c.1.21.2: Methyltetrahydrofolate-utiluzing methyltransferases [51723] (3 protein domains)
  6. 2089789Protein Cobalamin-dependent methionine synthase MetH, C-terminal domain [102104] (1 species)
    5-methyltetrahydrofolate homocysteine S-methyltransferase
  7. 2089790Species Thermotoga maritima [TaxId:2336] [102105] (8 PDB entries)
  8. 2089800Domain d1q8jb1: 1q8j B:301-558 [96212]
    Other proteins in same PDB: d1q8ja2, d1q8jb2
    complexed with c2f, cd, hcs

Details for d1q8jb1

PDB Entry: 1q8j (more details), 1.9 Å

PDB Description: cobalamin-dependent methionine synthase (1-566) from thermotoga maritima (cd2+, hcy, methyltetrahydrofolate complex)
PDB Compounds: (B:) 5-methyltetrahydrofolate S-homocysteine methyltransferase

SCOPe Domain Sequences for d1q8jb1:

Sequence, based on SEQRES records: (download)

>d1q8jb1 c.1.21.2 (B:301-558) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
favsspsklvtfdhfvvigerinpagrkklwaemqkgneeivikeaktqvekgaevldvn
fgiesqidvryvekivqtlpyvsnvplsldiqnvdlteralraypgrslfnsakvdeeel
emkinllkkyggtlivllmgkdvpksfeerkeyfekalkilerhdfsdrvifdpgvlplg
aegkpvevlktiefisskgfnttvglsnlsfglpdrsyyntaflvlgiskglssaimnpl
detlmktlnatlvilekk

Sequence, based on observed residues (ATOM records): (download)

>d1q8jb1 c.1.21.2 (B:301-558) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
favsspsklvtfdhfvvigerinpagrkklwaemqkgneeivikeaktqvekgaevldvn
fgiesqidvryvekivqtlpyvsnvplsldiqnvdlteralraypgrslfnsakvdeeel
emkinllkkyggtlivllsfeerkeyfekalkilerhdfsdrvifdpgvlplgaegkpve
vlktiefisskgfnttvglsnlspdrsyyntaflvlgiskglssaimnpldetlmktlna
tlvilekk

SCOPe Domain Coordinates for d1q8jb1:

Click to download the PDB-style file with coordinates for d1q8jb1.
(The format of our PDB-style files is described here.)

Timeline for d1q8jb1:

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Domains from same chain:
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d1q8jb2