Lineage for d1q8ia2 (1q8i A:390-783)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3016466Family e.8.1.1: DNA polymerase I [56673] (5 proteins)
    in the multi-domain class (e), this applies to domains with different numbers of (sub)domains than the most common domain
  6. 3016563Protein Family B DNA polymerase [56680] (7 species)
  7. 3016703Species Escherichia coli [TaxId:562] [103399] (1 PDB entry)
  8. 3016704Domain d1q8ia2: 1q8i A:390-783 [96209]
    Other proteins in same PDB: d1q8ia1

Details for d1q8ia2

PDB Entry: 1q8i (more details), 2 Å

PDB Description: crystal structure of escherichia coli dna polymerase ii
PDB Compounds: (A:) DNA polymerase II

SCOPe Domain Sequences for d1q8ia2:

Sequence, based on SEQRES records: (download)

>d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]}
nlgevpphaspggyvmdsrpglydsvlvldykslypsivrtflidpvglvegmaqpdpeh
stegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacr
ffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigral
vqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskkryagliqegdkqrm
vfkgletvrtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlr
rplseyqrnvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldy
ehyltrqlqpvaegilpfiednfatlmtgqlglf

Sequence, based on observed residues (ATOM records): (download)

>d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]}
nlgevpphaspggyvmdsrpglydsvlvldykslypsivrtflidpvglvegmaqpdpeh
stegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacr
ffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigral
vqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskkryagliqegdkqrm
vfkglettdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyspldyeh
yltrqlqpvaegilpfiednfatlmtgqlglf

SCOPe Domain Coordinates for d1q8ia2:

Click to download the PDB-style file with coordinates for d1q8ia2.
(The format of our PDB-style files is described here.)

Timeline for d1q8ia2:

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Domains from same chain:
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d1q8ia1