SCOPe 2.08: Domain d1q88b1: 1q88 B:148-341

Lineage for d1q88b1 (1q88 B:148-341)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.47: 39 kda initiator binding protein, IBP39, C-terminal domains [103408] (1 superfamily)
   2 closely associated domains: (1) all-alpha, EF-hand like; (2) alpha+beta, Frataxin-like

4. Superfamily e.47.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103409] (1 family)
   automatically mapped to Pfam PF11422

5. Family e.47.1.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103410] (1 protein)

6. Protein 39 kda initiator binding protein, IBP39, C-terminal domains [103411] (1 species)

7. Species Trichomonas vaginalis [TaxId:5722] [103412] (3 PDB entries)

8. Domain d1q88b1: 1q88 B:148-341 [96195]
   Other proteins in same PDB: d1q88b2

Details for d1q88b1

PDB Entry: 1q88, 2.42 Å

PDB Description: Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (monoclinic form)

PDB Compounds: (B:) 39 kDa initiator binding protein

SCOPe Domain Sequences for d1q88b1:

Sequence; same for both SEQRES and ATOM records:

>d1q88b1 e.47.1.1 (B:148-341) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
mcignstpneqetfrakvdeiwfrltqktdgtvmrdfliekaaeyfkqpeqpkqnaievi
saimapqeeqtkskadlykflamfgpyetimlkiaslllisnnkghwltfdpqaeknann
qrdsisgwfdqnepnclilktptgirkiwnkplieatgqylmdengekydswdkyfemkp
ietyltayptfapm

Timeline for d1q88b1:

• d1q88b1 first appeared in SCOP 1.67, called d1q88b_
  
• d1q88b1 appears in SCOPe 2.07