SCOPe 2.08: Domain d1q5aa_: 1q5a A:

Lineage for d1q5aa_ (1q5a A:)

1. Root: SCOPe 2.08

2. Class i: Low resolution protein structures [58117] (25 folds)

3. Fold i.20: Ep-cadherin [103681] (1 superfamily)

4. Superfamily i.20.1: Ep-cadherin [103682] (1 family)

5. Family i.20.1.1: Ep-cadherin [103683] (1 protein)

6. Protein Ep-cadherin [103684] (1 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [103685] (4 PDB entries)

8. Domain d1q5aa_: 1q5a A: [95882]
   complexed with ca, nag, ndg

Details for d1q5aa_

PDB Entry: 1q5a, 30 Å

PDB Description: s-shaped trans interactions of cadherins model based on fitting c- cadherin (1l3w) to 3d map of desmosomes obtained by electron tomography

PDB Compounds: (A:) EP-cadherin

SCOPe Domain Sequences for d1q5aa_:

Sequence; same for both SEQRES and ATOM records:

>d1q5aa_ i.20.1.1 (A:) Ep-cadherin {Mouse (Mus musculus) [TaxId: 10090]}
dwvippikvsenergpfpkrlvqiksnkdrfnkvyysitgqgadnppqgvfriewetgwm
lvtrpldreeydkyvlsshavsengspveepmeitinvidqndnrpkftqdvfrgsvreg
vqpgtqvmavsatdeddnidslngvlsysilkqdpeepipnlftinretgvisligtgld
rekfpeytltvqatdlegaglsvegkaiiqitdandnapifdpktytalvpeneigfevq
rlsvtdldmpgtpawqavykirvneggffnittdpesnqgilttakgldfelrkqyvlqi
tvenaepfsvplptstatvtvtvedvneapffvpavsrvdvsedlsrgekiislvaqdpd
kqqiqklsyfigndparwltvnkdngivtgngnldreseyvknntytvimlvtddgvsvg
tgtgtlilhvldvndngpvpsprvftmcdqnpepqvltisdadippntypykvslshgsd
ltwkaeldskgtsmllsptqqlkkgdysiyvllsdaqnnpqltvvnatvcscegkaikcq

Timeline for d1q5aa_:

• d1q5aa_ first appeared in SCOP 1.67
  
• d1q5aa_ appears in SCOPe 2.07