SCOP 1.67: Domain d1q40d_: 1q40 D:

Lineage for d1q40d_ (1q40 D:)

1. Root: SCOP 1.67

2. Class d: Alpha and beta proteins (a+b) [53931] (260 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (10 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.2: NTF2-like [54431] (5 proteins)

6. Protein NTF2-like domain of mRNA export factor MEX67 [89847] (2 species)
   similar to the TAP domain; forms complex with MTR2 similar to the TAP-p15 complex

7. Species Yeast (Candida albicans) [TaxId:5476] [102808] (1 PDB entry)

8. Domain d1q40d_: 1q40 D: [95773]
   Other proteins in same PDB: d1q40a_, d1q40c_
   complexed with gol

Details for d1q40d_

PDB Entry: 1q40, 1.95 Å

PDB Description: Crystal structure of the C. albicans Mtr2-Mex67 M domain complex

SCOP Domain Sequences for d1q40d_:

Sequence, based on SEQRES records:

>d1q40d_ d.17.4.2 (D:) NTF2-like domain of mRNA export factor MEX67 {Yeast (Candida albicans)}
dsrnlatnfianylklwdanrselmilyqnesqfsmqvdsshphliesgnsgysgstdfg
yylnnsrnltrvssikarmaklsigqeqiyksfqqlpktrhdiiatpelfsmevykfptl
ngimitlhgsfdevaqpevdgsassapsgprggsryhsgpkhkriplskksfdrtfvvip
gpngsmivasdtllirpytsdfpwk

Sequence, based on observed residues (ATOM records):

>d1q40d_ d.17.4.2 (D:) NTF2-like domain of mRNA export factor MEX67 {Yeast (Candida albicans)}
dsrnlatnfianylklwdanrselmilyqnesqfsmqvdsshphlsgstdfgyylnnsrn
ltrvssikarmaklsigqeqiyksfqqlpktrhdiiatpelfsmevykfptlngimitlh
gsfdevaqpevdgskriplskksfdrtfvvipgpsmivasdtllirpytsdfpwk

Timeline for d1q40d_:

• d1q40d_ is new in SCOP 1.67
  
• d1q40d_ appears in SCOP 1.69
  
• d1q40d_ appears in the current release, SCOPe 2.08