SCOPe 2.06: Domain d1q40b_: 1q40 B:

Lineage for d1q40b_ (1q40 B:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.2: NTF2-like [54431] (6 proteins)

6. Protein NTF2-like domain of mRNA export factor MEX67 [89847] (2 species)
   similar to the TAP domain; forms complex with MTR2 similar to the TAP-p15 complex

7. Species Yeast (Candida albicans) [TaxId:5476] [102808] (1 PDB entry)

8. Domain d1q40b_: 1q40 B: [95771]
   Other proteins in same PDB: d1q40a_, d1q40c_
   complexed with gol

Details for d1q40b_

PDB Entry: 1q40, 1.95 Å

PDB Description: Crystal structure of the C. albicans Mtr2-Mex67 M domain complex

PDB Compounds: (B:) mRNA export factor mex67

SCOPe Domain Sequences for d1q40b_:

Sequence, based on SEQRES records:

>d1q40b_ d.17.4.2 (B:) NTF2-like domain of mRNA export factor MEX67 {Yeast (Candida albicans) [TaxId: 5476]}
srnlatnfianylklwdanrselmilyqnesqfsmqvdsshphliesgnsgysgstdfgy
ylnnsrnltrvssikarmaklsigqeqiyksfqqlpktrhdiiatpelfsmevykfptln
gimitlhgsfdevaqpevdgsassapsgprggsryhsgpkhkriplskksfdrtfvvipg
pngsmivasdtllirpytsdfpwkv

Sequence, based on observed residues (ATOM records):

>d1q40b_ d.17.4.2 (B:) NTF2-like domain of mRNA export factor MEX67 {Yeast (Candida albicans) [TaxId: 5476]}
srnlatnfianylklwdanrselmilyqnesqfsmqvdsshphliesgstdfgyylnnsr
nltrvssikarmaklsigqeqiyksfqqlpktrhdiiatpelfsmevykfptlngimitl
hgsfdevaqpevdgsasryhsgpkhkriplskksfdrtfvvipgsmivasdtllirpyts
dfpwkv

Timeline for d1q40b_:

• d1q40b_ first appeared in SCOP 1.67
  
• d1q40b_ appears in SCOPe 2.05
  
• d1q40b_ appears in SCOPe 2.07
  
• d1q40b_ appears in the current release, SCOPe 2.08