SCOP 1.73: Domain d1pvyb_: 1pvy B:

Lineage for d1pvyb_ (1pvy B:)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.115: YrdC/RibB [55820] (1 superfamily)
   core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other

4. Superfamily d.115.1: YrdC/RibB [55821] (2 families)

5. Family d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64372] (1 protein)
   contains one additional helix in the C-terminal extension

6. Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64373] (4 species)

7. Species Archaeon Methanocaldococcus jannaschii [TaxId:2190] [103219] (3 PDB entries)

8. Domain d1pvyb_: 1pvy B: [95196]
   complexed with ca, r5p, zn; mutant

Details for d1pvyb_

PDB Entry: 1pvy, 1.7 Å

PDB Description: 3,4-dihydroxy-2-butanone 4-phosphate synthase from m. jannaschii in complex with ribulose 5-phosphate

PDB Compounds: (B:) 3,4-dihydroxy-2-butanone 4-phosphate synthase

SCOP Domain Sequences for d1pvyb_:

Sequence; same for both SEQRES and ATOM records:

>d1pvyb_ d.115.1.2 (B:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
nvekaiealkkgeiilvydsderegetdmvvasqfitpehirimrkdagglictalhpdi
cnklgipfmvdilefasqkfkvlrelypndipydekssfsitinhrktftgitdndraft
ikklaelvkegrfndfgkefrspgsvtllraaeglvknrqghtemtvalaelanlvpitt
icemmgddgnamsknetkryaekhnliylsgeeiinyyl

Timeline for d1pvyb_:

• d1pvyb_ first appeared in SCOP 1.67
  
• d1pvyb_ appears in SCOP 1.71
  
• d1pvyb_ appears in SCOP 1.75
  
• d1pvyb_ appears in the current release, SCOPe 2.08