SCOPe 2.06: Domain d1pvgb1: 1pvg B:246-405

Lineage for d1pvgb1 (1pvg B:246-405)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins)

6. Protein DNA topoisomerase II [102751] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [102752] (3 PDB entries)

8. Domain d1pvgb1: 1pvg B:246-405 [95163]
   Other proteins in same PDB: d1pvga2, d1pvgb2
   complexed with anp, mg

Details for d1pvgb1

PDB Entry: 1pvg, 1.8 Å

PDB Description: crystal structure of the atpase region of saccharomyces cerevisiae topoisomerase ii

PDB Compounds: (B:) DNA topoisomerase II

SCOPe Domain Sequences for d1pvgb1:

Sequence, based on SEQRES records:

>d1pvgb1 d.14.1.3 (B:246-405) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
nfknyvelylkslekkrqldngedgaaksdiptilyerinnrwevafavsdisfqqisfv
nsiattmggthvnyitdqivkkiseilkkkkkksvksfqiknnmfifinclienpaftsq
tkeqlttrvkdfgsrceipleyinkimktdlatrmfeiad

Sequence, based on observed residues (ATOM records):

>d1pvgb1 d.14.1.3 (B:246-405) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
nfknyvelylksleiptilyerinnrwevafavsdisfqqisfvnsiattmggthvnyit
dqivkkiseilkksvksfqiknnmfifinclienpaftsqtkeqlttrvkdfgsrceipl
eyinkimktdlatrmfeiad

Timeline for d1pvgb1:

• d1pvgb1 first appeared in SCOP 1.67
  
• d1pvgb1 appears in SCOPe 2.05
  
• d1pvgb1 appears in SCOPe 2.07
  
• d1pvgb1 appears in the current release, SCOPe 2.08