SCOPe 2.03: Domain d1pmmb_: 1pmm B:

Lineage for d1pmmb_ (1pmm B:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.6: Pyridoxal-dependent decarboxylase [69565] (4 proteins)
   automatically mapped to Pfam PF00282

6. Protein Glutamate decarboxylase beta, GadB [102596] (2 species)

7. Species Escherichia coli [TaxId:562] [102597] (5 PDB entries)

8. Domain d1pmmb_: 1pmm B: [94902]
   complexed with acy, plp

Details for d1pmmb_

PDB Entry: 1pmm, 2 Å

PDB Description: Crystal structure of Escherichia coli GadB (low pH)

PDB Compounds: (B:) Glutamate decarboxylase beta

SCOPe Domain Sequences for d1pmmb_:

Sequence; same for both SEQRES and ATOM records:

>d1pmmb_ c.67.1.6 (B:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}
kkqvtdlrselldsrfgaksistiaeskrfplhemrddvafqiindelyldgnarqnlat
fcqtwddenvhklmdlsinknwidkeeypqsaaidlrcvnmvadlwhapapkngqavgtn
tigsseacmlggmamkwrwrkrmeaagkptdkpnlvcgpvqicwhkfarywdvelreipm
rpgqlfmdpkrmieacdentigvvptfgvtytgnyefpqplhdaldkfqadtgididmhi
daasggflapfvapdivwdfrlprvksisasghkfglaplgcgwviwrdeealpqelvfn
vdylggqigtfainfsrpagqviaqyyeflrlgregytkvqnasyqvaayladeiaklgp
yefictgrpdegipavcfklkdgedpgytlydlserlrlrgwqvpaftlggeatdivvmr
imcrrgfemdfaellledykaslkylsdhp

Timeline for d1pmmb_:

• d1pmmb_ first appeared in SCOP 1.67
  
• d1pmmb_ appears in SCOPe 2.02
  
• d1pmmb_ appears in SCOPe 2.04
  
• d1pmmb_ appears in the current release, SCOPe 2.08