Lineage for d1pdla_ (1pdl A:)

  1. Root: SCOPe 2.08
  2. 3042554Class i: Low resolution protein structures [58117] (25 folds)
  3. 3045435Fold i.19: Bacteriophage T4 3D cryo-EM reconstruction [103674] (1 superfamily)
  4. 3045436Superfamily i.19.1: Bacteriophage T4 3D cryo-EM reconstruction [103675] (1 family) (S)
  5. 3045437Family i.19.1.1: Bacteriophage T4 3D cryo-EM reconstruction [103676] (1 protein)
  6. 3045438Protein Bacteriophage T4 3D cryo-EM reconstruction [103677] (1 species)
  7. 3045439Species Bacteriophage T4 [TaxId:10665] [103678] (7 PDB entries)
  8. 3045479Domain d1pdla_: 1pdl A: [94557]
    fitting of tail-associated lysozyme gp5

Details for d1pdla_

PDB Entry: 1pdl (more details)

PDB Description: fitting of gp5 in the cryoem reconstruction of the bacteriophage t4 baseplate
PDB Compounds: (A:) Tail-associated lysozyme

SCOPe Domain Sequences for d1pdla_:

Sequence, based on SEQRES records: (download)

>d1pdla_ i.19.1.1 (A:) Bacteriophage T4 3D cryo-EM reconstruction {Bacteriophage T4 [TaxId: 10665]}
nnlnwfvgvvedrmdplklgrvrvrvvglhppqraqgdvmgipteklpwmsviqpitsaa
msgiggsvtgpvegtrvyghfldkwktngivlgtyggivrekpnrlegfsdptgqyprrl
gndtnvlnqggevgydsssnviqdsnldtainpddrplseiptddnpnmsmaemlrrdeg
lrlkvywdtegyptigighlimkqpvrdmaqinkvlskqvgreitgnpgsitmeeattlf
erdladmqrdikshskvgpvwqavnrsrqmalenmafqmgvggvakfntmltamlagdwe
kaykagrdslwyqqtkgrasrvtmiiltgnlesygvevktparslsamaatvakssdpad
ppipndsrilfkepvssykgeypyvhtmetesghiqefddtpgqeryrlvhptgtyeevs
psgrrtrktvdnlyditnadgnflvagdkktnvggseiyynmdnrlhqidgsntifvrgd
etktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkvagtvdwd
vggdwtekmasmssissgqytidgsridig

Sequence, based on observed residues (ATOM records): (download)

>d1pdla_ i.19.1.1 (A:) Bacteriophage T4 3D cryo-EM reconstruction {Bacteriophage T4 [TaxId: 10665]}
nnlnwfvgvvedrmdplklgrvrvrvvglhppqraqgdvmgipteklpwmsviqpitsaa
msgiggsvtgpvegtrvyghfldkwktngivlgtyggivrekpnrlegfsdptgqyprrl
gndtnvlnqggevgydsssnviqdsnldtainpddrplseiptddnpnmsmaemlrrdeg
lrlkvywdtegyptigighlimkqpvrdmaqinkvlskqvgreitgnpgsitmeeattlf
erdladmqrdikshskvgpvwqavnrsrqmalenmafqmgvggvakfntmltamlagdwe
kaykagrdslwyqqtkgrasrvtmiiltgnlesygvevktdpadppipndsrilfkepvs
sykgeypyvhtmetesghiqefddtpgqeryrlvhptgtyeevspsgrrtrktvdnlydi
tnadgnflvagdkktnvggseiyynmdnrlhqidgsntifvrgdetktvegngtilvkgn
vtiivegnaditvkgdattlvegnqtntvngnlswkvagtvdwdvggdwtekmasmssis
sgqytidgsridig

SCOPe Domain Coordinates for d1pdla_:

Click to download the PDB-style file with coordinates for d1pdla_.
(The format of our PDB-style files is described here.)

Timeline for d1pdla_: