SCOPe 2.08: Domain d1pdjd_: 1pdj D:

Lineage for d1pdjd_ (1pdj D:)

1. Root: SCOPe 2.08

2. Class i: Low resolution protein structures [58117] (25 folds)

3. Fold i.19: Bacteriophage T4 3D cryo-EM reconstruction [103674] (1 superfamily)

4. Superfamily i.19.1: Bacteriophage T4 3D cryo-EM reconstruction [103675] (1 family)

5. Family i.19.1.1: Bacteriophage T4 3D cryo-EM reconstruction [103676] (1 protein)

6. Protein Bacteriophage T4 3D cryo-EM reconstruction [103677] (1 species)

7. Species Bacteriophage T4 [TaxId:10665] [103678] (7 PDB entries)

8. Domain d1pdjd_: 1pdj D: [94554]
   fitting of baseplate structural protein gp27

Details for d1pdjd_

PDB Entry: 1pdj

PDB Description: fitting of gp27 into cryoem reconstruction of bacteriophage t4 baseplate

PDB Compounds: (D:) Baseplate structural protein Gp27

SCOPe Domain Sequences for d1pdjd_:

Sequence, based on SEQRES records:

>d1pdjd_ i.19.1.1 (D:) Bacteriophage T4 3D cryo-EM reconstruction {Bacteriophage T4 [TaxId: 10665]}
lqrpgypnlsvklfdsydawsnnrfvelaatittltmrdslygrnegmlqfydsknihtk
mdgneiiqisvanandinnvktriygckhfsvsvdskgdniiaielgtihsienlkfgrp
ffpdagesikemlgviyqdrtlltpainainayvpdipwtstfenylsyvrevalavgsd
kfvfvwqdimgvnmmdydmminqepypmivgepsligqfiqelkyplaydfvwltksnph
krdpmknatiyahsfldssipmittgkgensivvsrsgaysemtyrngyeeairlqtmaq
ydgyakcstignfnltpgvkiifndsknqfktefyvdevihelsnnnsvthlymftnatk
letidpvkvknef

Sequence, based on observed residues (ATOM records):

>d1pdjd_ i.19.1.1 (D:) Bacteriophage T4 3D cryo-EM reconstruction {Bacteriophage T4 [TaxId: 10665]}
lqrpgypnlsvklfdsydawsnnrfvelaatittltmrdslygrnegmlqfydsknihtk
mdgneiiqisvanandinnvktriygckhfsvsvdskgdniiaielgtihsienlkfgrp
ffpdagesikemlgviyqdrtlltpainainayvpdipwtstfenylsyvrevalavgsd
kfvfvwqdimgvnmmdydmminqepypmivgepskyplaydfvwltksnphkrdpmknat
iyahsfldssipmittgkgensivvsrsgaysemtyrngyeeairlqtmaqydgyakcst
ignfnltpgvkiifndsknqfktefyvdevihelsnnnsvthlymftnatkletidpvkv
knef

Timeline for d1pdjd_:

• d1pdjd_ first appeared in SCOP 1.67
  
• d1pdjd_ appears in SCOPe 2.07