Lineage for d1pd1a1 (1pd1 A:647-753)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2326258Fold a.71: ERP29 C domain-like [47932] (2 superfamilies)
    5 helices; bundle
  4. 2326283Superfamily a.71.2: Helical domain of Sec23/24 [81811] (1 family) (S)
    automatically mapped to Pfam PF04815
  5. 2326284Family a.71.2.1: Helical domain of Sec23/24 [81812] (2 proteins)
  6. 2326291Protein Sec24 [81815] (1 species)
  7. 2326292Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [81816] (4 PDB entries)
  8. 2326293Domain d1pd1a1: 1pd1 A:647-753 [94507]
    Other proteins in same PDB: d1pd1a2, d1pd1a3, d1pd1a4, d1pd1a5
    complexed with a snare peptide
    complexed with zn

Details for d1pd1a1

PDB Entry: 1pd1 (more details), 2.6 Å

PDB Description: Crystal structure of the COPII coat subunit, Sec24, complexed with a peptide containing the DxE cargo sorting signal of yeast Sys1 protein
PDB Compounds: (A:) protein transport protein SEC24

SCOPe Domain Sequences for d1pd1a1:

Sequence, based on SEQRES records: (download)

>d1pd1a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

Sequence, based on observed residues (ATOM records): (download)

>d1pd1a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d1pd1a1:

Click to download the PDB-style file with coordinates for d1pd1a1.
(The format of our PDB-style files is described here.)

Timeline for d1pd1a1: