Lineage for d1pd0a2 (1pd0 A:133-215,A:553-646)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2363595Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2364706Superfamily b.2.8: beta-sandwich domain of Sec23/24 [81995] (1 family) (S)
  5. 2364707Family b.2.8.1: beta-sandwich domain of Sec23/24 [81996] (2 proteins)
  6. 2364714Protein Sec24 [81999] (1 species)
    includes the N-terminal tail
  7. 2364715Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82000] (4 PDB entries)
  8. 2364717Domain d1pd0a2: 1pd0 A:133-215,A:553-646 [94503]
    Other proteins in same PDB: d1pd0a1, d1pd0a3, d1pd0a4, d1pd0a5
    complexed with a snare peptide
    complexed with zn

Details for d1pd0a2

PDB Entry: 1pd0 (more details), 2.6 Å

PDB Description: Crystal structure of the COPII coat subunit, Sec24, complexed with a peptide from the SNARE protein Sed5 (yeast syntaxin-5)
PDB Compounds: (A:) protein transport protein SEC24

SCOPe Domain Sequences for d1pd0a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d1pd0a2:

Click to download the PDB-style file with coordinates for d1pd0a2.
(The format of our PDB-style files is described here.)

Timeline for d1pd0a2: