SCOP 1.71: Domain d1pcxa3: 1pcx A:301-552

Lineage for d1pcxa3 (1pcx A:301-552)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.62: vWA-like [53299] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.62.1: vWA-like [53300] (4 families)

5. Family c.62.1.2: Trunk domain of Sec23/24 [82458] (2 proteins)

6. Protein Sec24 [82461] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82462] (4 PDB entries)

8. Domain d1pcxa3: 1pcx A:301-552 [94499]
   Other proteins in same PDB: d1pcxa1, d1pcxa2, d1pcxa4, d1pcxa5
   complexed with a snare peptide
   complexed with zn

Details for d1pcxa3

PDB Entry: 1pcx, 2.5 Å

PDB Description: Crystal structure of the COPII coat subunit, Sec24, complexed with a peptide from the SNARE protein Bet1

SCOP Domain Sequences for d1pcxa3:

Sequence, based on SEQRES records:

>d1pcxa3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae)}
pppatycflidvsqssiksgllattintllqnldsipnhdertrisilcvdnaihyfkip
ldsenneesadqinmmdiadleepflprpnsmvvslkacrqnietlltkipqifqsnlit
nfalgpalksayhliggvggkiivvsgtlpnlgigklqrrnesgvvntsketaqllscqd
sfyknftidcskvqitvdlflasedymdvaslsnlsrftagqthfypgfsgknpndivkf
stefakhismdf

Sequence, based on observed residues (ATOM records):

>d1pcxa3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae)}
pppatycflidvsqssiksgllattintllqnldsipnhdertrisilcvdnaihyfkip
ldseninmmdiadleepnsmvvslkacrqnietlltkipqifqsnlitnfalgpalksay
hliggvggkiivvsgtlpnlgigklqrdsfyknftidcskvqitvdlflasedymdvasl
snlsrftagqthfypgfsgknpndivkfstefakhismdf

Timeline for d1pcxa3:

• d1pcxa3 first appeared in SCOP 1.67
  
• d1pcxa3 appears in SCOP 1.69
  
• d1pcxa3 appears in SCOP 1.73
  
• d1pcxa3 appears in the current release, SCOPe 2.08