SCOPe 2.05: Domain d1p6va_: 1p6v A:

Lineage for d1p6va_ (1p6v A:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.111: Small protein B (SmpB) [74981] (1 superfamily)
   barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold

4. Superfamily b.111.1: Small protein B (SmpB) [74982] (1 family)

5. Family b.111.1.1: Small protein B (SmpB) [74983] (1 protein)

6. Protein Small protein B (SmpB) [74984] (2 species)
   tmRNA-binding protein; SsrA-binding protein

7. Species Aquifex aeolicus [TaxId:63363] [74985] (2 PDB entries)

8. Domain d1p6va_: 1p6v A: [94191]
   complexed with tRNA domain of tmRNA
   protein/RNA complex

Details for d1p6va_

PDB Entry: 1p6v, 3.2 Å

PDB Description: Crystal structure of the tRNA domain of transfer-messenger RNA in complex with SmpB

PDB Compounds: (A:) SsrA-binding protein

SCOPe Domain Sequences for d1p6va_:

Sequence, based on SEQRES records:

>d1p6va_ b.111.1.1 (A:) Small protein B (SmpB) {Aquifex aeolicus [TaxId: 63363]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapykhatienhdplrkrklllhkreimrlygkvqekgytiiplklywknnkvkvli
alakgkkl

Sequence, based on observed residues (ATOM records):

>d1p6va_ b.111.1.1 (A:) Small protein B (SmpB) {Aquifex aeolicus [TaxId: 63363]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapykhanhdplrkrklllhkreimrlygkvqekgytiiplklywknnkvkvliala
kgkkl

Timeline for d1p6va_:

• d1p6va_ first appeared in SCOP 1.67
  
• d1p6va_ appears in SCOPe 2.04
  
• d1p6va_ appears in SCOPe 2.06
  
• d1p6va_ appears in the current release, SCOPe 2.08