Lineage for d1oupa_ (1oup A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2498207Fold d.4: His-Me finger endonucleases [54059] (1 superfamily)
    core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures
  4. 2498208Superfamily d.4.1: His-Me finger endonucleases [54060] (8 families) (S)
    common motif contains conserved histidine residue and metal-binding site
  5. 2498328Family d.4.1.6: Endonuclease I [102726] (2 protein domains)
    automatically mapped to Pfam PF04231
  6. 2498329Protein Periplasmic endonuclease Vvn [102727] (1 species)
  7. 2498330Species Vibrio vulnificus [TaxId:672] [102728] (2 PDB entries)
  8. 2498332Domain d1oupa_: 1oup A: [93555]
    complexed with DNA
    protein/DNA complex; complexed with ca

Details for d1oupa_

PDB Entry: 1oup (more details), 2.3 Å

PDB Description: crystal structure of the periplasmic endonuclease vvn complexed with octamer double stranded dna
PDB Compounds: (A:) Nuclease

SCOPe Domain Sequences for d1oupa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1oupa_ d.4.1.6 (A:) Periplasmic endonuclease Vvn {Vibrio vulnificus [TaxId: 672]}

SCOPe Domain Coordinates for d1oupa_:

Click to download the PDB-style file with coordinates for d1oupa_.
(The format of our PDB-style files is described here.)

Timeline for d1oupa_: