SCOPe 2.05: Domain d1otma_: 1otm A:

Lineage for d1otma_ (1otm A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.1: Internalin LRR domain [52059] (4 proteins)
   capped at the N-end with a truncated EF-hand subdomain
   this is a repeat family; one repeat unit is 2omx A:261-239 found in domain

6. Protein Internalin B [52060] (1 species)

7. Species Listeria monocytogenes [TaxId:1639] [52061] (6 PDB entries)

8. Domain d1otma_: 1otm A: [93523]
   mutant

Details for d1otma_

PDB Entry: 1otm, 1.93 Å

PDB Description: calcium-binding mutant of the internalin b lrr domain

PDB Compounds: (A:) internalin b

SCOPe Domain Sequences for d1otma_:

Sequence; same for both SEQRES and ATOM records:

>d1otma_ c.10.2.1 (A:) Internalin B {Listeria monocytogenes [TaxId: 1639]}
etitvstpikqifpdaafaetikanlkkksvtdavtqnelnsidqiiannsdiksvqgiq
ylpnvtklflngnkltdikpltnlknlgwlfldenkikdlsslkdlkklkslslehngis
dinglvhlpqleslylgnnkitditvlsrltkldtlslednqisdivplagltklqnlyl
sknhisdlralaglknldvlelfsqec

Timeline for d1otma_:

• d1otma_ first appeared in SCOP 1.67
  
• d1otma_ appears in SCOPe 2.04
  
• d1otma_ appears in SCOPe 2.06
  
• d1otma_ appears in the current release, SCOPe 2.08