SCOPe 2.08: Domain d1osbc_: 1osb C:

Lineage for d1osbc_ (1osb C:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.5: Relaxase domain [103120] (3 proteins)
   circular permutation of the common fold
   automatically mapped to Pfam PF08751

6. Protein TrwC relaxase [103123] (1 species)

7. Species Escherichia coli [TaxId:562] [103124] (3 PDB entries)

8. Domain d1osbc_: 1osb C: [93489]
   protein/DNA complex; complexed with so4

Details for d1osbc_

PDB Entry: 1osb, 2.65 Å

PDB Description: conjugative relaxase trwc in complex with orit dna. metal-free structure.

PDB Compounds: (C:) trwC protein

SCOPe Domain Sequences for d1osbc_:

Sequence, based on SEQRES records:

>d1osbc_ d.89.1.5 (C:) TrwC relaxase {Escherichia coli [TaxId: 562]}
mlshmvltrqdigraasyyedgaddyyakdgdasewqgkgaeelglsgevdskrfrella
gnigeghrimrsatrqdskerigldltfsapksvslqalvagdaeiikahdravartleq
aearaqarqkiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwral
kndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqia
ewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidf

Sequence, based on observed residues (ATOM records):

>d1osbc_ d.89.1.5 (C:) TrwC relaxase {Escherichia coli [TaxId: 562]}
mlshmvltrqdigraasyyegdasewqgkgaeelglsgevdskrfrellagnigeghrim
rsatrqdskerigldltfsapksvslqalvagdaeiikahdravartleqaearaqarqk
iqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwralkndeivkatr
ylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldp
nsvsleqkqaakvlsrakktsvdrealraewqatakelgidf

Timeline for d1osbc_:

• d1osbc_ first appeared in SCOP 1.67
  
• d1osbc_ appears in SCOPe 2.07