SCOP 1.67: Domain d1orrd_: 1orr D:

Lineage for d1orrd_ (1orr D:)

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (11 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (40 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein CDP-tyvelose-2-epimerase [102138] (1 species)

7. Species Salmonella typhi [TaxId:90370] [102139] (1 PDB entry)

8. Domain d1orrd_: 1orr D: [93463]
   complexed with cdp, nad

Details for d1orrd_

PDB Entry: 1orr, 1.5 Å

PDB Description: Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP

SCOP Domain Sequences for d1orrd_:

Sequence, based on SEQRES records:

>d1orrd_ c.2.1.2 (D:) CDP-tyvelose-2-epimerase {Salmonella typhi}
akllitggcgflgsnlasfalsqgidlivfdnlsrkgatdnlhwlsslgnfefvhgdirn
kndvtrlitkympdscfhlagqvamttsidnpcmdfeinvggtlnlleavrqynsncnii
ysstnkvygdleqykynetetrytcvdkpngydestqldfhspygcskgaadqymldyar
ifglntvvfrhssmyggrqfatydqgwvgwfcqkaveiknginkpftisgngkqvrdvlh
aedmislyftalanvskirgnafniggtivnslsllelfklledycnidmrftnlpvres
dqrvfvadikkitnaidwspkvsakdgvqkmydwtssi

Sequence, based on observed residues (ATOM records):

>d1orrd_ c.2.1.2 (D:) CDP-tyvelose-2-epimerase {Salmonella typhi}
akllitggcgflgsnlasfalsqgidlivfdnlsrkgatdnlhwlsslgnfefvhgdirn
kndvtrlitkympdscfhlagqvamttsidnpcmdfeinvggtlnlleavrqynsncnii
ysstnkvygdleqykynetetrytcvdkpngydestqldfhspygcskgaadqymldyar
ifglntvvfrhssmyggrqfatydqgwvgwfcqkaveikngipftisgngkqvrdvlhae
dmislyftalanvskirgnafniggtivnslsllelfklledycnidmrftnlpvresdq
rvfvadikkitnaidwspkvsakdgvqkmydwtssi

Timeline for d1orrd_:

• d1orrd_ is new in SCOP 1.67
  
• d1orrd_ appears in SCOP 1.69
  
• d1orrd_ appears in the current release, SCOPe 2.08, called d1orrd1