Lineage for d1onkb2 (1onk B:138-263)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 375317Fold b.42: beta-Trefoil [50352] (6 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 375486Superfamily b.42.2: Ricin B-like lectins [50370] (2 families) (S)
  5. 375487Family b.42.2.1: Ricin B-like [50371] (3 proteins)
  6. 375494Protein Plant cytotoxin B-chain (lectin) [50372] (5 species)
    duplication: consists of two domains of this fold
  7. 375501Species European mistletoe (Viscum album) [TaxId:3972] [50375] (5 PDB entries)
    different sequence variants
  8. 375505Domain d1onkb2: 1onk B:138-263 [93361]
    Other proteins in same PDB: d1onka_
    complexed with azi, gol, nag, po4

Details for d1onkb2

PDB Entry: 1onk (more details), 2.1 Å

PDB Description: mistletoe lectin i from viscum album

SCOP Domain Sequences for d1onkb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1onkb2 b.42.2.1 (B:138-263) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album)}
taprevtiygfrdlcmesnggsvwvetcdssqknqkwalygdgsirpkqnqdqcltsgrd
svstvinivscsgasgsqrwvftnegailnlknglamdvaqanpklrriiiypatgkpnq
mwlpvf

SCOP Domain Coordinates for d1onkb2:

Click to download the PDB-style file with coordinates for d1onkb2.
(The format of our PDB-style files is described here.)

Timeline for d1onkb2:

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Domains from same chain:
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d1onkb1
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Domains from other chains:
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d1onka_